JC Virus by PCR Quantitative, Urine

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General Information

Lab Name
JCV PCR Quant, URN
Lab Code
UJCVQN
Epic Ordering
JCV Quantitative PCR, Urine
Description

The detection and quantification of JC Virus (JCV) by real-time PCR amplification. The primers used in this PCR reaction amplify the Large T antigen gene. The JC Virus probes are labeled with reporter dye FAM and quencher TAMRA. Quantification of JC Virus DNA (copies/mL) is achieved by amplifying standard curves consisting of serial dilutions of a known number of DNA containing the JC Virus amplicons. The minimum virus level that gives a positive result in 95% of replicates is 500 copies/mL (2.70 log copies/mL).

This test was developed and its performance characteristics determined by the University of Washington Department of Laboratory Medicine and Pathology. It has not been cleared or approved by the US Food and Drug Administration.

For Blood, CSF, or Clear non-cellular fluid (ex: BAL, or Washing), see JC Virus by PCR Quantitative [JCVQN].

For Tissue Biopsy, Bone Marrow, Swab, or Cellular fluid (ex: BAL or Washing), see JC Virus Qualitative PCR, Tissue [JCVQLT].

Synonyms
JC Virus, PML Virus, Progressive Multifocal Leukoencephalopathy virus
Components

Interpretation

Method

Real-time Polymerase Chain Reaction

Reference Range
See individual components

Ordering & Collection

Specimen Type
Urine
Collection

Urine: 10 mL Random or Clean catch urine in sterile container.

Note: Separate specimens MUST be submitted when both Viral Culture or Serology and PCR testing are ordered.

Unacceptable Samples: Urine with Preservative.

Handling Instructions
Quantity
requested: 10 mL Urine
minimum: 5 mL Urine

Processing

Processing

Urine: Send urine at 2-8°C (ice pack) within 48 hours of collection. Sample may be stored at 2-8°C (ice pack) for up to 48 hours from collection. Freeze at -10°C or colder. Do not freeze/thaw.

Outside Laboratories: Ship samples on dry ice, do not freeze/thaw. If freezer and/or dry ice is not available, ship immediately at 2-8°C (ice pack), shipment time must not exceed 48 hours from collection. Samples stored at 2-8°C greater than 48 hours old may be rejected.

Performance

LIS Dept Code
Virology, Eastlake (EVIR)
Performing Location(s)
Other Virology, Molecular
206-685-6656

Virology Laboratory, Ste 320
1616 Eastlake Ave E.
Seattle, WA 98102

Frequency
Tuesday. Results same day.
Available STAT?
No

Billing & Coding

CPT codes
87799
LOINC
49411-2
Interfaced Order Code
UOW1668