January 2022 Test Revisions for Molecular Microbiology
Several Molecular Microbiology test codes are changing effective January 3, 2022 as described below. The old codes will no longer be active after this date. A new version of the order form will be available on 01/03/22.
Apart from the changes in the codes, the results for individual tests will include a separate line for each gene target amplified. Currently results from all assay targets are reported in one line. Example reports are available by contacting molmicdx@uw.edu
Note that in order to maintain consistency with current taxonomic nomenclature several battery names have been modified as well. The updated names are reflected in the table below.
Battery Name | Old Code | New Code |
---|---|---|
AFB ID by Sequence Analysis | AFBSEQ | ASEQID |
Aspergillus fumigatus DNA detection by PCR | ASPPCR | ASPDNA |
Bacterial DNA detection by PCR | BCTPCR | BCTDNA |
Bacterial ID by Sequence Analysis | BCTSEQ | BSEQID |
Bartonella DNA detection by PCR | BRTPCR | BRTDNA |
Coccidioides DNA detection by PCR | COCPCR | COCDNA |
Cryptococcus neoformans and Cryptococcus gattii DNA detection by PCR | CRYPCR | CRYDNA |
Enterobacterales DNA detection by PCR | ENBPCR | ENBDNA |
Fungal DNA detection by PCR | FUNPCR | FUNDNA |
Histoplasma DNA detection by PCR | HISPCR | HISDNA |
Legionella DNA detection by PCR | LEGPCR | LEGDNA |
Mold ID by Sequence Analysis | MLDSEQ | MSEQID |
Mucorales DNA detection by PCR | ZGMPCR | MUCDNA |
Mycobacterium avium complex DNA detection by PCR | MAVPCR | MAVDNA |
Mycobacterium tuberculosis complex DNA detection by PCR | TBCPCR | TBCDNA |
Mycoplasma DNA detection by PCR | MPLPCR | MPLDNA |
Nontuberculous Mycobacteria DNA detection by PCR | NTMPCR | NTMDNA |
Pneumocystis DNA detection by PCR | PNEPCR | PNEDNA |
Toxoplasma gondii DNA detection by PCR | TOXPCR | TOXDNA |
Tropheryma whipplei DNA detection by PCR | TWHPCR | TWHDNA |
Yeast ID by Sequence Analysis | YSTSEQ | YSEQID |
The following batteries will not change:
- 16S rRNA Reflexive Next Generation Sequencing (NGS16S)
- Acanthamoeba and Balamuthia species PCR (AMBPCR)
- Leishmania species DNA detection by PCR (LSHDNA)
- Whole Genome Strain Typing (NGSTYP)
- mecA gene detection (MECPCR)
Associated Tests
Last updated 2021-12-16T20:14:10.924658+00:00